Research guides: BIO353H5: Plant Development: Data Visualization

Gene Expression & Genomic Data

GenMAPP
A computer application designed to visualize gene expression and other genomic data on maps representing biological pathways and groupings of genes.
Cytoscape
An open source software platform for visualizing molecular interaction networks and biological pathways and integrating these networks with annotations, gene expression profiles and other state data.
The Database for Annotation, Visualization and Integrated Discovery (DAVID )
A set of functional annotation tools for investigators to understand biological meaning behind large list of genes.

The BAR (The Bio-Analytic Resource for Plant Biology) contains web-based tools for visualizing functional genomics and other data.

VirtualPlant 1.3
VirtualPlant integrates genomic data and provides visualization and analysis tools for rapid and efficient exploration of genomic data.